Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 AL020989.1-201ENST00000422979 469 ntBASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 DNAJB3-202ENST00000449667 1266 ntBASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC141Q6ZP82 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 AC006504.4-201ENST00000592118 1568 ntBASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 MCCD1P2-201ENST00000423228 335 ntBASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 MIR3687-2-201ENST00000577708 61 ntBASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 MIR3687-1-201ENST00000614492 61 ntBASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
CCDC141Q6ZP82 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 SIRPAP1-201ENST00000448467 1770 ntBASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 AL049757.1-201ENST00000616842 1596 ntBASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 KRT18P2-201ENST00000447938 1258 ntBASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 YBX1P5-201ENST00000509441 847 ntBASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC26.72■■□□□ 1.87
CCDC141Q6ZP82 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 FUT8-AS1-201ENST00000621019 1521 ntBASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 COX5A-206ENST00000568783 571 ntTSL 3 BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 CROCCP3-202ENST00000420820 1947 ntBASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC141Q6ZP82 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CCDC141Q6ZP82 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
CCDC141Q6ZP82 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC26.7■■□□□ 1.87
CCDC141Q6ZP82 TCAP-202ENST00000578283 583 ntTSL 5 BASIC26.7■■□□□ 1.87
CCDC141Q6ZP82 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC26.7■■□□□ 1.87
CCDC141Q6ZP82 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
CCDC141Q6ZP82 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC26.7■■□□□ 1.86
CCDC141Q6ZP82 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
CCDC141Q6ZP82 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC26.7■■□□□ 1.86
CCDC141Q6ZP82 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
CCDC141Q6ZP82 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC26.7■■□□□ 1.86
CCDC141Q6ZP82 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC141Q6ZP82 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 AC003669.1-201ENST00000334569 611 ntBASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 CYB561-217ENST00000582997 877 ntTSL 5 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 MTDHP5-201ENST00000598980 586 ntBASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 AL355385.1-201ENST00000606123 409 ntBASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC141Q6ZP82 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC141Q6ZP82 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC141Q6ZP82 AC022898.2-201ENST00000616822 1312 ntBASIC26.68■■□□□ 1.86
CCDC141Q6ZP82 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC141Q6ZP82 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC26.68■■□□□ 1.86
CCDC141Q6ZP82 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms