Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LYSMD4Q5XG99 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
LYSMD4Q5XG99 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
LYSMD4Q5XG99 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 AP006288.1-201ENST00000446065 395 ntBASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 LINC02084-201ENST00000606069 1096 ntBASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.64■□□□□ 0.41
LYSMD4Q5XG99 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 AC073621.1-201ENST00000392730 636 ntBASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 AC122714.2-201ENST00000502787 707 ntBASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 AL596442.2-201ENST00000610240 980 ntBASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LYSMD4Q5XG99 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 PRYP5-201ENST00000451909 266 ntBASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 AFG3L1P-217ENST00000557444 2447 ntBASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 AC004817.3-201ENST00000602957 2129 ntBASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 GMCL1P1-201ENST00000463439 1581 ntBASIC17.62■□□□□ 0.41
LYSMD4Q5XG99 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 AC096633.1-201ENST00000422446 749 ntBASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 MCCD1P2-201ENST00000423228 335 ntBASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 AC005829.1-201ENST00000570002 483 ntBASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 AD001527.2-201ENST00000622994 785 ntBASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 KRT18P28-201ENST00000453838 1332 ntBASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 AC022898.2-201ENST00000616822 1312 ntBASIC17.61■□□□□ 0.41
LYSMD4Q5XG99 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms