Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 AL390719.2-201ENST00000606993 987 ntBASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 AL024508.2-201ENST00000607749 1894 ntBASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC39BQ5VTQ0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 TSPY22P-201ENST00000427496 604 ntBASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 RNF126P1-202ENST00000569893 925 ntBASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 AC005332.3-201ENST00000589904 676 ntBASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 Z83836.1-201ENST00000624605 1642 ntBASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC39BQ5VTQ0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC39BQ5VTQ0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.77■□□□□ 0.59
TTC39BQ5VTQ0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.76■□□□□ 0.59
TTC39BQ5VTQ0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms