Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 NBPF21P-201ENST00000425093 1451 ntBASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GFI1BQ5VTD9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 LINC00602-201ENST00000629776 2065 ntBASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 KRT17P3-201ENST00000420566 1262 ntBASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 AC069544.1-201ENST00000609399 999 ntBASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
GFI1BQ5VTD9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 AC138028.4-201ENST00000564984 1845 ntBASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GFI1BQ5VTD9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms