Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AC022144.1-201ENST00000602255 1580 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AC098614.1-201ENST00000368528 745 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AC234783.1-201ENST00000441761 496 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AC015967.2-201ENST00000624092 234 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AC006435.4-201ENST00000625037 234 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AL356737.1-201ENST00000634391 234 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC140878.1-201ENST00000565277 250 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC009407.1-201ENST00000568958 598 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC133561.1-201ENST00000568600 2415 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 IGHJ2P-201ENST00000454480 60 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC005237.2-201ENST00000434368 219 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 TTTY23B-201ENST00000442790 549 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 INE1-201ENST00000456273 945 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC020931.1-201ENST00000589622 1346 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC026150.2-201ENST00000564693 1156 ntBASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UBR4Q5T4S7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 TSSK5P-201ENST00000423978 907 ntBASIC9.74□□□□□ -0.85
UBR4Q5T4S7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC9.74□□□□□ -0.85
UBR4Q5T4S7 MIR6756-201ENST00000616240 63 ntBASIC9.74□□□□□ -0.85
UBR4Q5T4S7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
UBR4Q5T4S7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms