Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 HTR7P1-202ENST00000624664 4411 ntBASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM35AQ53FP2 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM35AQ53FP2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 AL031133.1-201ENST00000406807 723 ntBASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 NTF6B-201ENST00000591913 560 ntBASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 AC116407.2-201ENST00000613639 860 ntBASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 Z83836.1-201ENST00000624605 1642 ntBASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM35AQ53FP2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 RNF126P1-202ENST00000569893 925 ntBASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM35AQ53FP2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35AQ53FP2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM35AQ53FP2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM35AQ53FP2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms