Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 AL391807.1-203ENST00000604392 2365 ntBASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 AC117947.1-201ENST00000427448 529 ntBASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 KRT18P57-201ENST00000443599 1254 ntBASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 DUTP2-201ENST00000519164 463 ntBASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PP12613-201ENST00000424958 2230 ntBASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP13A4Q4VNC1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 AC092597.1-201ENST00000487352 616 ntBASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 YBX1P2-201ENST00000489612 999 ntBASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP13A4Q4VNC1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATP13A4Q4VNC1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 BX664615.1-201ENST00000443558 458 ntBASIC18.78■□□□□ 0.6
ATP13A4Q4VNC1 KRT18P38-201ENST00000449496 1282 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms