Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.95□□□□□ -0.5
SYCNQ0VAF6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 SLC25A6P5-201ENST00000435663 894 ntBASIC11.95□□□□□ -0.5
SYCNQ0VAF6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SYCNQ0VAF6 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 AL133373.2-201ENST00000623187 2828 ntBASIC11.94□□□□□ -0.5
SYCNQ0VAF6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 LIN28AP1-201ENST00000429574 405 ntBASIC11.94□□□□□ -0.5
SYCNQ0VAF6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 SEC1P-202ENST00000473944 940 ntBASIC11.94□□□□□ -0.5
SYCNQ0VAF6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 AC066615.1-201ENST00000640911 628 ntBASIC11.94□□□□□ -0.5
SYCNQ0VAF6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYCNQ0VAF6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SYCNQ0VAF6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms