Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.43□□□□□ -0.26
CMC4P56277 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 RNF126P1-202ENST00000569893 925 ntBASIC13.43□□□□□ -0.26
CMC4P56277 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.43□□□□□ -0.26
CMC4P56277 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 AC124864.1-201ENST00000623408 392 ntBASIC13.43□□□□□ -0.26
CMC4P56277 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.43□□□□□ -0.26
CMC4P56277 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CMC4P56277 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC13.43□□□□□ -0.26
CMC4P56277 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 FLJ13224-201ENST00000313737 1514 ntBASIC13.43□□□□□ -0.26
CMC4P56277 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CMC4P56277 LINC00602-201ENST00000629776 2065 ntBASIC13.43□□□□□ -0.26
CMC4P56277 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 KRT18P1-202ENST00000452408 1331 ntBASIC13.42□□□□□ -0.26
CMC4P56277 AC093677.2-201ENST00000600169 1863 ntBASIC13.42□□□□□ -0.26
CMC4P56277 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CMC4P56277 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CMC4P56277 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.42□□□□□ -0.26
CMC4P56277 UPK3BP1-201ENST00000428678 509 ntBASIC13.42□□□□□ -0.26
CMC4P56277 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.42□□□□□ -0.26
CMC4P56277 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.42□□□□□ -0.26
CMC4P56277 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.42□□□□□ -0.26
CMC4P56277 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.42□□□□□ -0.26
CMC4P56277 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.42□□□□□ -0.26
CMC4P56277 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.42□□□□□ -0.26
CMC4P56277 Z69720.1-201ENST00000601483 472 ntBASIC13.42□□□□□ -0.26
CMC4P56277 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.42□□□□□ -0.26
CMC4P56277 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.42□□□□□ -0.26
CMC4P56277 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
CMC4P56277 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.42□□□□□ -0.26
CMC4P56277 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.42□□□□□ -0.26
CMC4P56277 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.42□□□□□ -0.26
CMC4P56277 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CMC4P56277 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CMC4P56277 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CMC4P56277 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CMC4P56277 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CMC4P56277 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CMC4P56277 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.41□□□□□ -0.26
CMC4P56277 MTCL1P1-201ENST00000446207 792 ntBASIC13.41□□□□□ -0.26
CMC4P56277 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
CMC4P56277 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CMC4P56277 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.41□□□□□ -0.26
CMC4P56277 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CMC4P56277 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.41□□□□□ -0.26
CMC4P56277 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.41□□□□□ -0.26
CMC4P56277 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.41□□□□□ -0.26
CMC4P56277 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.41□□□□□ -0.26
CMC4P56277 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.41□□□□□ -0.26
CMC4P56277 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CMC4P56277 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
CMC4P56277 AC016734.2-201ENST00000624325 1377 ntBASIC13.41□□□□□ -0.26
CMC4P56277 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CMC4P56277 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms