Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.19■□□□□ 0.5
LIMK2P53671 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LIMK2P53671 AC090340.1-201ENST00000620778 4980 ntBASIC18.19■□□□□ 0.5
LIMK2P53671 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.19■□□□□ 0.5
LIMK2P53671 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.19■□□□□ 0.5
LIMK2P53671 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.19■□□□□ 0.5
LIMK2P53671 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.19■□□□□ 0.5
LIMK2P53671 AC009065.1-201ENST00000564055 1225 ntBASIC18.19■□□□□ 0.5
LIMK2P53671 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LIMK2P53671 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 AC116407.4-201ENST00000623319 1061 ntBASIC18.19■□□□□ 0.5
LIMK2P53671 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LIMK2P53671 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIMK2P53671 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LIMK2P53671 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.18■□□□□ 0.5
LIMK2P53671 AC138932.1-201ENST00000534164 6830 ntBASIC18.18■□□□□ 0.5
LIMK2P53671 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LIMK2P53671 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LIMK2P53671 AC006116.8-202ENST00000587620 1550 ntBASIC18.18■□□□□ 0.5
LIMK2P53671 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LIMK2P53671 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.18■□□□□ 0.5
LIMK2P53671 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.18■□□□□ 0.5
LIMK2P53671 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.18■□□□□ 0.5
LIMK2P53671 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.18■□□□□ 0.5
LIMK2P53671 AL136038.3-201ENST00000561909 1096 ntBASIC18.18■□□□□ 0.5
LIMK2P53671 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.18■□□□□ 0.5
LIMK2P53671 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.18■□□□□ 0.5
LIMK2P53671 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.18■□□□□ 0.5
LIMK2P53671 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.18■□□□□ 0.5
LIMK2P53671 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LIMK2P53671 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
LIMK2P53671 KRT18P55-202ENST00000578578 1546 ntBASIC18.18■□□□□ 0.5
LIMK2P53671 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 AC012317.2-201ENST00000623305 2251 ntBASIC18.18■□□□□ 0.5
LIMK2P53671 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIMK2P53671 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 HCG11-201ENST00000411553 5696 ntBASIC18.17■□□□□ 0.5
LIMK2P53671 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.17■□□□□ 0.5
LIMK2P53671 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LIMK2P53671 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.17■□□□□ 0.5
LIMK2P53671 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.17■□□□□ 0.5
LIMK2P53671 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.17■□□□□ 0.5
LIMK2P53671 AC104390.1-201ENST00000555663 520 ntBASIC18.17■□□□□ 0.5
LIMK2P53671 MIR3180-4-201ENST00000582223 153 ntBASIC18.17■□□□□ 0.5
LIMK2P53671 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.17■□□□□ 0.5
LIMK2P53671 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIMK2P53671 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms