Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC25A1P53007 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC25A1P53007 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC25A1P53007 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC25A1P53007 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC25A1P53007 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
SLC25A1P53007 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 AL355312.1-201ENST00000407115 2176 ntBASIC16.03■□□□□ 0.16
SLC25A1P53007 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC25A1P53007 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC25A1P53007 AP000523.1-201ENST00000398242 1049 ntBASIC16.03■□□□□ 0.16
SLC25A1P53007 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC25A1P53007 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC25A1P53007 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC25A1P53007 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC25A1P53007 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC25A1P53007 AL023806.1-201ENST00000603994 1649 ntBASIC16.03■□□□□ 0.16
SLC25A1P53007 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 PP12613-201ENST00000424958 2230 ntBASIC16.03■□□□□ 0.16
SLC25A1P53007 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SLC25A1P53007 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC25A1P53007 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC25A1P53007 KRT8P9-201ENST00000558927 1449 ntBASIC16.02■□□□□ 0.16
SLC25A1P53007 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SLC25A1P53007 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
SLC25A1P53007 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC25A1P53007 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC25A1P53007 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC25A1P53007 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC25A1P53007 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC25A1P53007 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC25A1P53007 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SLC25A1P53007 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC25A1P53007 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC25A1P53007 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC25A1P53007 AC113404.2-201ENST00000507884 177 ntBASIC16.02■□□□□ 0.16
SLC25A1P53007 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SLC25A1P53007 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC25A1P53007 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC25A1P53007 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC25A1P53007 AC116407.2-201ENST00000613639 860 ntBASIC16.02■□□□□ 0.16
SLC25A1P53007 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC25A1P53007 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC25A1P53007 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SLC25A1P53007 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC25A1P53007 AC141586.5-201ENST00000624546 2050 ntBASIC16.02■□□□□ 0.15
SLC25A1P53007 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC25A1P53007 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC25A1P53007 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SLC25A1P53007 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC25A1P53007 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC25A1P53007 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC25A1P53007 OR6D1P-202ENST00000641007 5290 ntBASIC16.02■□□□□ 0.15
SLC25A1P53007 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SLC25A1P53007 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC25A1P53007 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC25A1P53007 AC108860.2-201ENST00000562760 2183 ntBASIC16.02■□□□□ 0.15
SLC25A1P53007 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
SLC25A1P53007 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SLC25A1P53007 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
SLC25A1P53007 MMP23A-201ENST00000234610 1017 ntBASIC16.01■□□□□ 0.15
SLC25A1P53007 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.01■□□□□ 0.15
SLC25A1P53007 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC25A1P53007 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms