Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
BRCA2P51587 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCA2P51587 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
BRCA2P51587 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
BRCA2P51587 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCA2P51587 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRCA2P51587 AC093214.1-201ENST00000511688 1107 ntBASIC20.06■□□□□ 0.8
BRCA2P51587 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BRCA2P51587 AC022145.2-201ENST00000598203 171 ntBASIC20.06■□□□□ 0.8
BRCA2P51587 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
BRCA2P51587 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCA2P51587 LINC00628-201ENST00000628516 1289 ntBASIC20.06■□□□□ 0.8
BRCA2P51587 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCA2P51587 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BRCA2P51587 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BRCA2P51587 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BRCA2P51587 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BRCA2P51587 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCA2P51587 AL008721.1-201ENST00000609964 604 ntBASIC20.05■□□□□ 0.8
BRCA2P51587 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCA2P51587 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCA2P51587 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.05■□□□□ 0.8
BRCA2P51587 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.05■□□□□ 0.8
BRCA2P51587 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.05■□□□□ 0.8
BRCA2P51587 AC068587.9-201ENST00000641814 219 ntBASIC20.05■□□□□ 0.8
BRCA2P51587 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BRCA2P51587 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.05■□□□□ 0.8
BRCA2P51587 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
BRCA2P51587 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.05■□□□□ 0.8
BRCA2P51587 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BRCA2P51587 AC069262.1-201ENST00000539058 672 ntBASIC20.05■□□□□ 0.8
BRCA2P51587 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.05■□□□□ 0.8
BRCA2P51587 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.04■□□□□ 0.8
BRCA2P51587 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 LINC01126-201ENST00000623515 1646 ntBASIC20.04■□□□□ 0.8
BRCA2P51587 BX005266.1-201ENST00000473402 457 ntBASIC20.04■□□□□ 0.8
BRCA2P51587 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.04■□□□□ 0.8
BRCA2P51587 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.04■□□□□ 0.8
BRCA2P51587 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.04■□□□□ 0.8
BRCA2P51587 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
BRCA2P51587 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.04■□□□□ 0.8
BRCA2P51587 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BRCA2P51587 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BRCA2P51587 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.04■□□□□ 0.8
BRCA2P51587 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.03■□□□□ 0.8
BRCA2P51587 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BRCA2P51587 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 AC132938.6-201ENST00000623828 1655 ntBASIC20.03■□□□□ 0.8
BRCA2P51587 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCA2P51587 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 AC236430.1-201ENST00000402231 743 ntBASIC20.03■□□□□ 0.8
BRCA2P51587 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.03■□□□□ 0.8
BRCA2P51587 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 AC009102.3-201ENST00000623118 1491 ntBASIC20.03■□□□□ 0.8
BRCA2P51587 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.03■□□□□ 0.8
BRCA2P51587 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.03■□□□□ 0.8
BRCA2P51587 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 AC105339.1-204ENST00000636249 355 ntBASIC20.03■□□□□ 0.8
BRCA2P51587 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
BRCA2P51587 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.03■□□□□ 0.8
BRCA2P51587 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
BRCA2P51587 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
BRCA2P51587 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
BRCA2P51587 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRCA2P51587 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.02■□□□□ 0.8
BRCA2P51587 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.02■□□□□ 0.8
BRCA2P51587 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.02■□□□□ 0.8
BRCA2P51587 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.02■□□□□ 0.8
BRCA2P51587 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.02■□□□□ 0.8
BRCA2P51587 AC010507.1-201ENST00000633895 436 ntBASIC20.02■□□□□ 0.8
BRCA2P51587 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BRCA2P51587 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.02■□□□□ 0.8
BRCA2P51587 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
BRCA2P51587 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRCA2P51587 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.02■□□□□ 0.8
BRCA2P51587 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BRCA2P51587 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
BRCA2P51587 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms