Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
HLCSP50747 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLCSP50747 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLCSP50747 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HLCSP50747 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLCSP50747 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLCSP50747 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLCSP50747 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HLCSP50747 AC036111.1-201ENST00000533973 1582 ntBASIC17.27■□□□□ 0.35
HLCSP50747 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.27■□□□□ 0.35
HLCSP50747 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLCSP50747 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
HLCSP50747 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HLCSP50747 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HLCSP50747 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
HLCSP50747 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.26■□□□□ 0.35
HLCSP50747 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.26■□□□□ 0.35
HLCSP50747 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 AC135776.1-201ENST00000319817 2481 ntBASIC17.26■□□□□ 0.35
HLCSP50747 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.26■□□□□ 0.35
HLCSP50747 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HLCSP50747 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HLCSP50747 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HLCSP50747 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
HLCSP50747 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.25■□□□□ 0.35
HLCSP50747 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLCSP50747 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 STARP1-201ENST00000397973 869 ntBASIC17.25■□□□□ 0.35
HLCSP50747 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.25■□□□□ 0.35
HLCSP50747 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.25■□□□□ 0.35
HLCSP50747 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HLCSP50747 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HLCSP50747 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HLCSP50747 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HLCSP50747 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HLCSP50747 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLCSP50747 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLCSP50747 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.24■□□□□ 0.35
HLCSP50747 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLCSP50747 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HLCSP50747 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLCSP50747 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
HLCSP50747 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.24■□□□□ 0.35
HLCSP50747 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLCSP50747 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.24■□□□□ 0.35
HLCSP50747 AL109659.2-201ENST00000606809 1674 ntBASIC17.24■□□□□ 0.35
HLCSP50747 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLCSP50747 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.24■□□□□ 0.35
HLCSP50747 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLCSP50747 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms