Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SSR1P43307 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.19■□□□□ 0.66
SSR1P43307 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SSR1P43307 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.19■□□□□ 0.66
SSR1P43307 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SSR1P43307 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR1P43307 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR1P43307 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSR1P43307 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SSR1P43307 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SSR1P43307 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR1P43307 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.18■□□□□ 0.66
SSR1P43307 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.18■□□□□ 0.66
SSR1P43307 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSR1P43307 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.18■□□□□ 0.66
SSR1P43307 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SSR1P43307 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.18■□□□□ 0.66
SSR1P43307 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 AL596275.1-201ENST00000423464 877 ntBASIC19.18■□□□□ 0.66
SSR1P43307 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.18■□□□□ 0.66
SSR1P43307 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.18■□□□□ 0.66
SSR1P43307 AC009065.1-201ENST00000564055 1225 ntBASIC19.18■□□□□ 0.66
SSR1P43307 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.18■□□□□ 0.66
SSR1P43307 FER1L4-210ENST00000615531 5998 ntBASIC19.18■□□□□ 0.66
SSR1P43307 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SSR1P43307 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.18■□□□□ 0.66
SSR1P43307 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSR1P43307 AC008764.6-201ENST00000595909 2069 ntBASIC19.18■□□□□ 0.66
SSR1P43307 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SSR1P43307 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSR1P43307 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSR1P43307 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SSR1P43307 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR1P43307 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR1P43307 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SSR1P43307 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 AC009947.2-201ENST00000444014 672 ntBASIC19.17■□□□□ 0.66
SSR1P43307 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.17■□□□□ 0.66
SSR1P43307 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 AC024243.1-201ENST00000609234 778 ntBASIC19.17■□□□□ 0.66
SSR1P43307 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSR1P43307 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SSR1P43307 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSR1P43307 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR1P43307 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSR1P43307 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR1P43307 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.17■□□□□ 0.66
SSR1P43307 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSR1P43307 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms