Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KRT20P35900 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
KRT20P35900 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KRT20P35900 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
KRT20P35900 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 AP000593.1-201ENST00000393668 712 ntBASIC17.17■□□□□ 0.34
KRT20P35900 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
KRT20P35900 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KRT20P35900 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT20P35900 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KRT20P35900 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
KRT20P35900 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
KRT20P35900 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
KRT20P35900 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT20P35900 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.16■□□□□ 0.34
KRT20P35900 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 AC009053.2-201ENST00000563701 2365 ntBASIC17.16■□□□□ 0.34
KRT20P35900 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KRT20P35900 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
KRT20P35900 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT20P35900 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.16■□□□□ 0.34
KRT20P35900 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.16■□□□□ 0.34
KRT20P35900 AC009065.1-201ENST00000564055 1225 ntBASIC17.16■□□□□ 0.34
KRT20P35900 NEK4P2-201ENST00000580004 1012 ntBASIC17.16■□□□□ 0.34
KRT20P35900 AC140113.3-201ENST00000605663 199 ntBASIC17.16■□□□□ 0.34
KRT20P35900 AC112497.1-201ENST00000624824 639 ntBASIC17.16■□□□□ 0.34
KRT20P35900 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
KRT20P35900 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
KRT20P35900 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KRT20P35900 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
KRT20P35900 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT20P35900 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT20P35900 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.15■□□□□ 0.34
KRT20P35900 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.15■□□□□ 0.34
KRT20P35900 AC141257.4-201ENST00000634557 245 ntBASIC17.15■□□□□ 0.34
KRT20P35900 AC136944.6-201ENST00000634818 245 ntBASIC17.15■□□□□ 0.34
KRT20P35900 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
KRT20P35900 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
KRT20P35900 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KRT20P35900 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms