Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.56■□□□□ 0.88
COPB2P35606 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.56■□□□□ 0.88
COPB2P35606 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.56■□□□□ 0.88
COPB2P35606 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.56■□□□□ 0.88
COPB2P35606 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.56■□□□□ 0.88
COPB2P35606 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.56■□□□□ 0.88
COPB2P35606 AC021087.4-201ENST00000563761 564 ntBASIC20.56■□□□□ 0.88
COPB2P35606 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COPB2P35606 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COPB2P35606 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
COPB2P35606 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
COPB2P35606 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
COPB2P35606 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.55■□□□□ 0.88
COPB2P35606 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.55■□□□□ 0.88
COPB2P35606 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.55■□□□□ 0.88
COPB2P35606 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
COPB2P35606 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.55■□□□□ 0.88
COPB2P35606 HNRNPDP1-201ENST00000439535 754 ntBASIC20.55■□□□□ 0.88
COPB2P35606 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 RPL13AP23-201ENST00000480739 586 ntBASIC20.55■□□□□ 0.88
COPB2P35606 SART3-203ENST00000546611 1184 ntBASIC20.55■□□□□ 0.88
COPB2P35606 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 AL049840.3-201ENST00000602669 611 ntBASIC20.55■□□□□ 0.88
COPB2P35606 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.55■□□□□ 0.88
COPB2P35606 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.55■□□□□ 0.88
COPB2P35606 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COPB2P35606 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.54■□□□□ 0.88
COPB2P35606 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.54■□□□□ 0.88
COPB2P35606 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.54■□□□□ 0.88
COPB2P35606 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
COPB2P35606 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.54■□□□□ 0.88
COPB2P35606 KRT18P13-201ENST00000400056 1290 ntBASIC20.54■□□□□ 0.88
COPB2P35606 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.54■□□□□ 0.88
COPB2P35606 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.54■□□□□ 0.88
COPB2P35606 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.54■□□□□ 0.88
COPB2P35606 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.54■□□□□ 0.88
COPB2P35606 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.54■□□□□ 0.88
COPB2P35606 AC116407.3-201ENST00000623905 1129 ntBASIC20.54■□□□□ 0.88
COPB2P35606 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.54■□□□□ 0.88
COPB2P35606 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
COPB2P35606 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.54■□□□□ 0.88
COPB2P35606 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
COPB2P35606 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COPB2P35606 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
COPB2P35606 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COPB2P35606 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COPB2P35606 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.53■□□□□ 0.88
COPB2P35606 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COPB2P35606 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.53■□□□□ 0.88
COPB2P35606 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.53■□□□□ 0.88
COPB2P35606 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.53■□□□□ 0.88
COPB2P35606 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.53■□□□□ 0.88
COPB2P35606 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
COPB2P35606 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COPB2P35606 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.53■□□□□ 0.88
COPB2P35606 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
COPB2P35606 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.53■□□□□ 0.88
COPB2P35606 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.53■□□□□ 0.88
COPB2P35606 HLA-J-201ENST00000462773 1622 ntBASIC20.53■□□□□ 0.88
COPB2P35606 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COPB2P35606 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COPB2P35606 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPB2P35606 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms