Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXD13P35453 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HOXD13P35453 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HOXD13P35453 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HOXD13P35453 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HOXD13P35453 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXD13P35453 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD13P35453 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD13P35453 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXD13P35453 KRT8P26-201ENST00000534154 1276 ntBASIC19.67■□□□□ 0.74
HOXD13P35453 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXD13P35453 AL353801.3-201ENST00000609898 542 ntBASIC19.67■□□□□ 0.74
HOXD13P35453 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXD13P35453 AL358472.4-201ENST00000633140 710 ntBASIC19.67■□□□□ 0.74
HOXD13P35453 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 LINC00896-202ENST00000609602 2128 ntBASIC19.67■□□□□ 0.74
HOXD13P35453 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXD13P35453 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
HOXD13P35453 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD13P35453 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXD13P35453 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HOXD13P35453 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD13P35453 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD13P35453 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXD13P35453 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXD13P35453 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD13P35453 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD13P35453 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXD13P35453 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HOXD13P35453 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD13P35453 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXD13P35453 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXD13P35453 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD13P35453 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HOXD13P35453 GNAS-203ENST00000306120 1878 ntBASIC19.65■□□□□ 0.74
HOXD13P35453 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
HOXD13P35453 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD13P35453 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXD13P35453 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD13P35453 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD13P35453 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.65■□□□□ 0.74
HOXD13P35453 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.65■□□□□ 0.74
HOXD13P35453 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXD13P35453 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HOXD13P35453 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HOXD13P35453 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.65■□□□□ 0.74
HOXD13P35453 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXD13P35453 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXD13P35453 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms