Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN7P35236 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN7P35236 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN7P35236 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PTPN7P35236 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN7P35236 GCSHP2-201ENST00000560971 527 ntBASIC18.65■□□□□ 0.58
PTPN7P35236 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN7P35236 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN7P35236 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN7P35236 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PTPN7P35236 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.65■□□□□ 0.58
PTPN7P35236 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTPN7P35236 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN7P35236 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN7P35236 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN7P35236 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTPN7P35236 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN7P35236 LINC00602-201ENST00000629776 2065 ntBASIC18.64■□□□□ 0.57
PTPN7P35236 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN7P35236 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTPN7P35236 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN7P35236 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN7P35236 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN7P35236 AL355312.1-201ENST00000407115 2176 ntBASIC18.64■□□□□ 0.57
PTPN7P35236 AL138688.1-201ENST00000624851 1594 ntBASIC18.64■□□□□ 0.57
PTPN7P35236 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
PTPN7P35236 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 KRT18P65-201ENST00000439811 1286 ntBASIC18.63■□□□□ 0.57
PTPN7P35236 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPN7P35236 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPN7P35236 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPN7P35236 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN7P35236 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN7P35236 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN7P35236 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PTPN7P35236 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PTPN7P35236 PP12613-201ENST00000424958 2230 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms