Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.34■□□□□ 0.21
GDF1P27539 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GDF1P27539 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
GDF1P27539 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
GDF1P27539 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.33■□□□□ 0.21
GDF1P27539 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
GDF1P27539 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
GDF1P27539 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
GDF1P27539 TSPY19P-201ENST00000418461 509 ntBASIC16.33■□□□□ 0.2
GDF1P27539 TSPY18P-201ENST00000441642 509 ntBASIC16.33■□□□□ 0.2
GDF1P27539 AC096582.2-201ENST00000510860 516 ntBASIC16.33■□□□□ 0.2
GDF1P27539 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.33■□□□□ 0.2
GDF1P27539 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.33■□□□□ 0.2
GDF1P27539 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 IFNL4P1-201ENST00000607083 540 ntBASIC16.33■□□□□ 0.2
GDF1P27539 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
GDF1P27539 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.33■□□□□ 0.2
GDF1P27539 AL138781.2-201ENST00000617896 1843 ntBASIC16.33■□□□□ 0.2
GDF1P27539 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GDF1P27539 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
GDF1P27539 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.32■□□□□ 0.2
GDF1P27539 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.32■□□□□ 0.2
GDF1P27539 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GDF1P27539 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.32■□□□□ 0.2
GDF1P27539 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.32■□□□□ 0.2
GDF1P27539 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GDF1P27539 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.32■□□□□ 0.2
GDF1P27539 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.32■□□□□ 0.2
GDF1P27539 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.32■□□□□ 0.2
GDF1P27539 KRT18P31-201ENST00000506277 1292 ntBASIC16.32■□□□□ 0.2
GDF1P27539 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.32■□□□□ 0.2
GDF1P27539 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.32■□□□□ 0.2
GDF1P27539 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
GDF1P27539 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.32■□□□□ 0.2
GDF1P27539 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 AL353801.3-201ENST00000609898 542 ntBASIC16.32■□□□□ 0.2
GDF1P27539 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.32■□□□□ 0.2
GDF1P27539 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.32■□□□□ 0.2
GDF1P27539 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GDF1P27539 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.31■□□□□ 0.2
GDF1P27539 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.31■□□□□ 0.2
GDF1P27539 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GDF1P27539 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GDF1P27539 AC132938.6-201ENST00000623828 1655 ntBASIC16.31■□□□□ 0.2
GDF1P27539 AC093010.1-201ENST00000473625 1624 ntBASIC16.31■□□□□ 0.2
GDF1P27539 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 AC004870.1-201ENST00000315132 882 ntBASIC16.31■□□□□ 0.2
GDF1P27539 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GDF1P27539 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms