Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL023973.1-201ENST00000624619 620 ntBASIC16.88■□□□□ 0.29
CHMP24386 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHMP24386 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP24386 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHMP24386 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP24386 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHMP24386 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.88■□□□□ 0.29
CHMP24386 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHMP24386 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP24386 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP24386 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP24386 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP24386 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHMP24386 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHMP24386 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CHMP24386 MIR564-202ENST00000385049 94 ntBASIC16.87■□□□□ 0.29
CHMP24386 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHMP24386 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.87■□□□□ 0.29
CHMP24386 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 AC092647.4-201ENST00000457211 535 ntBASIC16.87■□□□□ 0.29
CHMP24386 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.87■□□□□ 0.29
CHMP24386 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.87■□□□□ 0.29
CHMP24386 AL441883.1-201ENST00000566170 1045 ntBASIC16.87■□□□□ 0.29
CHMP24386 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.87■□□□□ 0.29
CHMP24386 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP24386 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP24386 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHMP24386 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP24386 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHMP24386 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP24386 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHMP24386 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP24386 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CHMP24386 AC099398.1-201ENST00000567919 2776 ntBASIC16.86■□□□□ 0.29
CHMP24386 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP24386 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CHMP24386 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP24386 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.86■□□□□ 0.29
CHMP24386 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.86■□□□□ 0.29
CHMP24386 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.86■□□□□ 0.29
CHMP24386 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 NTF6B-201ENST00000591913 560 ntBASIC16.86■□□□□ 0.29
CHMP24386 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHMP24386 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.86■□□□□ 0.29
CHMP24386 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms