Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
XPAP23025 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.18■□□□□ 0.5
XPAP23025 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.18■□□□□ 0.5
XPAP23025 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.18■□□□□ 0.5
XPAP23025 AC104819.1-201ENST00000504587 486 ntBASIC18.18■□□□□ 0.5
XPAP23025 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
XPAP23025 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
XPAP23025 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
XPAP23025 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.17■□□□□ 0.5
XPAP23025 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.17■□□□□ 0.5
XPAP23025 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.17■□□□□ 0.5
XPAP23025 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.17■□□□□ 0.5
XPAP23025 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.17■□□□□ 0.5
XPAP23025 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.17■□□□□ 0.5
XPAP23025 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
XPAP23025 CLEC4GP1-201ENST00000596555 870 ntBASIC18.17■□□□□ 0.5
XPAP23025 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.17■□□□□ 0.5
XPAP23025 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
XPAP23025 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
XPAP23025 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.17■□□□□ 0.5
XPAP23025 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
XPAP23025 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.16■□□□□ 0.5
XPAP23025 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.16■□□□□ 0.5
XPAP23025 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.16■□□□□ 0.5
XPAP23025 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.16■□□□□ 0.5
XPAP23025 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.16■□□□□ 0.5
XPAP23025 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.16■□□□□ 0.5
XPAP23025 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
XPAP23025 AC074051.2-201ENST00000565115 352 ntBASIC18.16■□□□□ 0.5
XPAP23025 AC009154.2-201ENST00000621177 724 ntBASIC18.16■□□□□ 0.5
XPAP23025 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
XPAP23025 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.16■□□□□ 0.5
XPAP23025 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
XPAP23025 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
XPAP23025 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
XPAP23025 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XPAP23025 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.15■□□□□ 0.5
XPAP23025 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
XPAP23025 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
XPAP23025 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
XPAP23025 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.15■□□□□ 0.5
XPAP23025 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
XPAP23025 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
XPAP23025 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms