Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.53■□□□□ 0.08
CCL1P22362 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCL1P22362 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.52■□□□□ 0.08
CCL1P22362 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CCL1P22362 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CCL1P22362 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.52■□□□□ 0.08
CCL1P22362 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 GCSHP2-201ENST00000560971 527 ntBASIC15.52■□□□□ 0.08
CCL1P22362 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.52■□□□□ 0.08
CCL1P22362 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.52■□□□□ 0.08
CCL1P22362 AC145285.6-201ENST00000604632 637 ntBASIC15.52■□□□□ 0.08
CCL1P22362 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.52■□□□□ 0.08
CCL1P22362 AL023806.1-201ENST00000603994 1649 ntBASIC15.52■□□□□ 0.08
CCL1P22362 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.52■□□□□ 0.07
CCL1P22362 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.52■□□□□ 0.07
CCL1P22362 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL1P22362 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CCL1P22362 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL1P22362 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL1P22362 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.52■□□□□ 0.07
CCL1P22362 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL1P22362 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL1P22362 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CCL1P22362 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CCL1P22362 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL1P22362 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL1P22362 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CCL1P22362 HLA-J-201ENST00000462773 1622 ntBASIC15.51■□□□□ 0.07
CCL1P22362 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.51■□□□□ 0.07
CCL1P22362 DDX43P3-201ENST00000441064 443 ntBASIC15.51■□□□□ 0.07
CCL1P22362 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL1P22362 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL1P22362 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 AC024563.2-201ENST00000603282 481 ntBASIC15.51■□□□□ 0.07
CCL1P22362 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL1P22362 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL1P22362 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL1P22362 PRORSD1P-202ENST00000563365 2154 ntBASIC15.51■□□□□ 0.07
CCL1P22362 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CCL1P22362 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CCL1P22362 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL1P22362 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CCL1P22362 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL1P22362 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL1P22362 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCL1P22362 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCL1P22362 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.5■□□□□ 0.07
CCL1P22362 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCL1P22362 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.5■□□□□ 0.07
CCL1P22362 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL1P22362 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.5■□□□□ 0.07
CCL1P22362 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL1P22362 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CCL1P22362 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.5■□□□□ 0.07
CCL1P22362 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.5■□□□□ 0.07
CCL1P22362 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL1P22362 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.5■□□□□ 0.07
CCL1P22362 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL1P22362 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.5■□□□□ 0.07
CCL1P22362 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.5■□□□□ 0.07
CCL1P22362 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCL1P22362 LINC01451-201ENST00000623792 534 ntBASIC15.5■□□□□ 0.07
CCL1P22362 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CCL1P22362 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms