Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.83■□□□□ 0.13
RAB3BP20337 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3BP20337 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3BP20337 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
RAB3BP20337 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3BP20337 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.83■□□□□ 0.13
RAB3BP20337 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3BP20337 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RAB3BP20337 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3BP20337 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
RAB3BP20337 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB3BP20337 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAB3BP20337 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RAB3BP20337 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 AC098934.4-201ENST00000564127 592 ntBASIC15.83■□□□□ 0.12
RAB3BP20337 AL138781.1-201ENST00000566567 1274 ntBASIC15.83■□□□□ 0.12
RAB3BP20337 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.83■□□□□ 0.12
RAB3BP20337 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3BP20337 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3BP20337 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAB3BP20337 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.83■□□□□ 0.12
RAB3BP20337 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.83■□□□□ 0.12
RAB3BP20337 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 CROCCP2-202ENST00000412962 2773 ntBASIC15.82■□□□□ 0.12
RAB3BP20337 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RAB3BP20337 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAB3BP20337 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 MIR149-201ENST00000384879 89 ntBASIC15.82■□□□□ 0.12
RAB3BP20337 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB3BP20337 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 MTDHP1-201ENST00000605323 784 ntBASIC15.82■□□□□ 0.12
RAB3BP20337 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC15.82■□□□□ 0.12
RAB3BP20337 AC046158.3-201ENST00000624947 2558 ntBASIC15.82■□□□□ 0.12
RAB3BP20337 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB3BP20337 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RAB3BP20337 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 AC133963.1-201ENST00000504166 1679 ntBASIC15.82■□□□□ 0.12
RAB3BP20337 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAB3BP20337 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.82■□□□□ 0.12
RAB3BP20337 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.82■□□□□ 0.12
RAB3BP20337 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.82■□□□□ 0.12
RAB3BP20337 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAB3BP20337 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.81■□□□□ 0.12
RAB3BP20337 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RAB3BP20337 NIFKP9-201ENST00000419265 221 ntBASIC15.81■□□□□ 0.12
RAB3BP20337 NCF1B-203ENST00000435988 1254 ntBASIC15.81■□□□□ 0.12
RAB3BP20337 MCCD1P1-208ENST00000445732 328 ntBASIC15.81■□□□□ 0.12
RAB3BP20337 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB3BP20337 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms