Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.15■□□□□ 0.5
VCLP18206 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
VCLP18206 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.15■□□□□ 0.5
VCLP18206 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCLP18206 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.15■□□□□ 0.5
VCLP18206 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VCLP18206 KRT8P50-201ENST00000562022 1438 ntBASIC18.15■□□□□ 0.5
VCLP18206 LINC01311-201ENST00000565162 1445 ntBASIC18.15■□□□□ 0.5
VCLP18206 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.5
VCLP18206 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.14■□□□□ 0.5
VCLP18206 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.14■□□□□ 0.49
VCLP18206 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.14■□□□□ 0.49
VCLP18206 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
VCLP18206 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.14■□□□□ 0.49
VCLP18206 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.14■□□□□ 0.49
VCLP18206 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.14■□□□□ 0.49
VCLP18206 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.14■□□□□ 0.49
VCLP18206 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.14■□□□□ 0.49
VCLP18206 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.14■□□□□ 0.49
VCLP18206 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.14■□□□□ 0.49
VCLP18206 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
VCLP18206 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VCLP18206 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.14■□□□□ 0.49
VCLP18206 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
VCLP18206 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.14■□□□□ 0.49
VCLP18206 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
VCLP18206 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.14■□□□□ 0.49
VCLP18206 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCLP18206 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
VCLP18206 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VCLP18206 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
VCLP18206 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VCLP18206 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.13■□□□□ 0.49
VCLP18206 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 AL031133.1-201ENST00000406807 723 ntBASIC18.13■□□□□ 0.49
VCLP18206 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.13■□□□□ 0.49
VCLP18206 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.13■□□□□ 0.49
VCLP18206 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.13■□□□□ 0.49
VCLP18206 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
VCLP18206 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.13■□□□□ 0.49
VCLP18206 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VCLP18206 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.13■□□□□ 0.49
VCLP18206 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.13■□□□□ 0.49
VCLP18206 AC008764.6-201ENST00000595909 2069 ntBASIC18.13■□□□□ 0.49
VCLP18206 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.13■□□□□ 0.49
VCLP18206 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VCLP18206 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCLP18206 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VCLP18206 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VCLP18206 AL162741.1-201ENST00000565563 1558 ntBASIC18.13■□□□□ 0.49
VCLP18206 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VCLP18206 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
VCLP18206 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
VCLP18206 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VCLP18206 ESPNP-201ENST00000270691 2015 ntBASIC18.12■□□□□ 0.49
VCLP18206 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VCLP18206 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
VCLP18206 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.12■□□□□ 0.49
VCLP18206 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.12■□□□□ 0.49
VCLP18206 ZNF444P1-201ENST00000559497 298 ntBASIC18.12■□□□□ 0.49
VCLP18206 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.12■□□□□ 0.49
VCLP18206 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.12■□□□□ 0.49
VCLP18206 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VCLP18206 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms