Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GJA1P17302 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.67■□□□□ 0.58
GJA1P17302 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.67■□□□□ 0.58
GJA1P17302 KRT18P58-201ENST00000527480 1120 ntBASIC18.67■□□□□ 0.58
GJA1P17302 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.67■□□□□ 0.58
GJA1P17302 AC012640.2-201ENST00000561606 901 ntBASIC18.67■□□□□ 0.58
GJA1P17302 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.67■□□□□ 0.58
GJA1P17302 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GJA1P17302 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GJA1P17302 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GJA1P17302 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GJA1P17302 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GJA1P17302 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GJA1P17302 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GJA1P17302 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GJA1P17302 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.66■□□□□ 0.58
GJA1P17302 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GJA1P17302 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.66■□□□□ 0.58
GJA1P17302 AC007967.3-201ENST00000434308 558 ntBASIC18.66■□□□□ 0.58
GJA1P17302 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.66■□□□□ 0.58
GJA1P17302 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.66■□□□□ 0.58
GJA1P17302 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.66■□□□□ 0.58
GJA1P17302 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.66■□□□□ 0.58
GJA1P17302 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
GJA1P17302 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GJA1P17302 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.66■□□□□ 0.58
GJA1P17302 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.65■□□□□ 0.58
GJA1P17302 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.65■□□□□ 0.58
GJA1P17302 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 CROCCP3-202ENST00000420820 1947 ntBASIC18.65■□□□□ 0.58
GJA1P17302 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 AC092910.1-201ENST00000482027 1129 ntBASIC18.65■□□□□ 0.58
GJA1P17302 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.65■□□□□ 0.58
GJA1P17302 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.65■□□□□ 0.58
GJA1P17302 NKAPP1-205ENST00000585790 367 ntBASIC18.65■□□□□ 0.58
GJA1P17302 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.65■□□□□ 0.58
GJA1P17302 AC025062.2-201ENST00000605477 670 ntBASIC18.65■□□□□ 0.58
GJA1P17302 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.65■□□□□ 0.58
GJA1P17302 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.65■□□□□ 0.58
GJA1P17302 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 PHGDH-209ENST00000641074 1780 ntBASIC18.65■□□□□ 0.58
GJA1P17302 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GJA1P17302 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GJA1P17302 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
GJA1P17302 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
GJA1P17302 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.58
GJA1P17302 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GJA1P17302 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GJA1P17302 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
GJA1P17302 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GJA1P17302 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GJA1P17302 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GJA1P17302 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GJA1P17302 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.64■□□□□ 0.57
GJA1P17302 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GJA1P17302 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
GJA1P17302 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.64■□□□□ 0.57
GJA1P17302 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GJA1P17302 KRT18P13-201ENST00000400056 1290 ntBASIC18.64■□□□□ 0.57
GJA1P17302 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GJA1P17302 AC092865.5-201ENST00000545435 363 ntBASIC18.64■□□□□ 0.57
GJA1P17302 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.64■□□□□ 0.57
GJA1P17302 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.64■□□□□ 0.57
GJA1P17302 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.64■□□□□ 0.57
GJA1P17302 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.64■□□□□ 0.57
GJA1P17302 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.64■□□□□ 0.57
GJA1P17302 TERC-201ENST00000602385 541 ntBASIC18.64■□□□□ 0.57
GJA1P17302 AC139530.3-201ENST00000620344 690 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms