Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.06■□□□□ 0.32
NCK1P16333 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NCK1P16333 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NCK1P16333 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 ESRRAP1-201ENST00000400596 1257 ntBASIC17.06■□□□□ 0.32
NCK1P16333 MESTP1-201ENST00000404287 994 ntBASIC17.06■□□□□ 0.32
NCK1P16333 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCK1P16333 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NCK1P16333 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.06■□□□□ 0.32
NCK1P16333 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.06■□□□□ 0.32
NCK1P16333 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.06■□□□□ 0.32
NCK1P16333 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
NCK1P16333 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.06■□□□□ 0.32
NCK1P16333 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.06■□□□□ 0.32
NCK1P16333 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NCK1P16333 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCK1P16333 AC036111.1-201ENST00000533973 1582 ntBASIC17.06■□□□□ 0.32
NCK1P16333 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NCK1P16333 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.06■□□□□ 0.32
NCK1P16333 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NCK1P16333 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCK1P16333 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.05■□□□□ 0.32
NCK1P16333 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
NCK1P16333 AP000692.2-201ENST00000608391 879 ntBASIC17.05■□□□□ 0.32
NCK1P16333 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.05■□□□□ 0.32
NCK1P16333 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.05■□□□□ 0.32
NCK1P16333 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.05■□□□□ 0.32
NCK1P16333 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCK1P16333 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.05■□□□□ 0.32
NCK1P16333 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NCK1P16333 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 AC100803.2-201ENST00000562459 1963 ntBASIC17.04■□□□□ 0.32
NCK1P16333 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NCK1P16333 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 MIR935-201ENST00000401179 91 ntBASIC17.04■□□□□ 0.32
NCK1P16333 AL353807.1-201ENST00000427475 662 ntBASIC17.04■□□□□ 0.32
NCK1P16333 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 AF186192.3-201ENST00000583427 947 ntBASIC17.04■□□□□ 0.32
NCK1P16333 MIR3180-5-201ENST00000583743 153 ntBASIC17.04■□□□□ 0.32
NCK1P16333 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NCK1P16333 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NCK1P16333 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
NCK1P16333 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
NCK1P16333 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCK1P16333 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms