Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
UBL4AP11441 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
UBL4AP11441 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
UBL4AP11441 RASA4DP-201ENST00000460726 1199 ntBASIC16.71■□□□□ 0.27
UBL4AP11441 AC008687.5-201ENST00000593746 558 ntBASIC16.71■□□□□ 0.27
UBL4AP11441 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.71■□□□□ 0.27
UBL4AP11441 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
UBL4AP11441 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
UBL4AP11441 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
UBL4AP11441 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.71■□□□□ 0.27
UBL4AP11441 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.71■□□□□ 0.26
UBL4AP11441 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.7■□□□□ 0.26
UBL4AP11441 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBL4AP11441 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL4AP11441 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL4AP11441 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
UBL4AP11441 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.7■□□□□ 0.26
UBL4AP11441 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.7■□□□□ 0.26
UBL4AP11441 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.7■□□□□ 0.26
UBL4AP11441 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.7■□□□□ 0.26
UBL4AP11441 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.7■□□□□ 0.26
UBL4AP11441 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
UBL4AP11441 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
UBL4AP11441 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBL4AP11441 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBL4AP11441 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
UBL4AP11441 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBL4AP11441 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.69■□□□□ 0.26
UBL4AP11441 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.69■□□□□ 0.26
UBL4AP11441 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
UBL4AP11441 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.69■□□□□ 0.26
UBL4AP11441 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.69■□□□□ 0.26
UBL4AP11441 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.69■□□□□ 0.26
UBL4AP11441 AC006011.2-201ENST00000621313 1158 ntBASIC16.69■□□□□ 0.26
UBL4AP11441 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
UBL4AP11441 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.69■□□□□ 0.26
UBL4AP11441 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
UBL4AP11441 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.69■□□□□ 0.26
UBL4AP11441 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
UBL4AP11441 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBL4AP11441 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
UBL4AP11441 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBL4AP11441 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.69■□□□□ 0.26
UBL4AP11441 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBL4AP11441 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.69■□□□□ 0.26
UBL4AP11441 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.68■□□□□ 0.26
UBL4AP11441 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms