Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 AC021087.4-201ENST00000563761 564 ntBASIC19.7■□□□□ 0.74
COL1A2P08123 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.7■□□□□ 0.74
COL1A2P08123 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.7■□□□□ 0.74
COL1A2P08123 COX5BP2-201ENST00000392354 334 ntBASIC19.7■□□□□ 0.74
COL1A2P08123 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
COL1A2P08123 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.7■□□□□ 0.74
COL1A2P08123 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
COL1A2P08123 AD001527.2-201ENST00000622994 785 ntBASIC19.7■□□□□ 0.74
COL1A2P08123 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL1A2P08123 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 IL9RP2-201ENST00000423948 1312 ntBASIC19.69■□□□□ 0.74
COL1A2P08123 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
COL1A2P08123 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
COL1A2P08123 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.69■□□□□ 0.74
COL1A2P08123 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 PMPCAP1-201ENST00000508114 1576 ntBASIC19.69■□□□□ 0.74
COL1A2P08123 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COL1A2P08123 RPS2P28-201ENST00000314255 741 ntBASIC19.69■□□□□ 0.74
COL1A2P08123 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.69■□□□□ 0.74
COL1A2P08123 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.69■□□□□ 0.74
COL1A2P08123 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.69■□□□□ 0.74
COL1A2P08123 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.69■□□□□ 0.74
COL1A2P08123 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.69■□□□□ 0.74
COL1A2P08123 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.69■□□□□ 0.74
COL1A2P08123 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.69■□□□□ 0.74
COL1A2P08123 FAM215A-202ENST00000632077 792 ntBASIC19.69■□□□□ 0.74
COL1A2P08123 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL1A2P08123 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.68■□□□□ 0.74
COL1A2P08123 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.68■□□□□ 0.74
COL1A2P08123 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.68■□□□□ 0.74
COL1A2P08123 HNRNPDP1-201ENST00000439535 754 ntBASIC19.68■□□□□ 0.74
COL1A2P08123 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
COL1A2P08123 AC116407.2-201ENST00000613639 860 ntBASIC19.68■□□□□ 0.74
COL1A2P08123 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.68■□□□□ 0.74
COL1A2P08123 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.68■□□□□ 0.74
COL1A2P08123 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
COL1A2P08123 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.68■□□□□ 0.74
COL1A2P08123 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL1A2P08123 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL1A2P08123 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms