Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ANO7L1-203ENST00000602586 1720 ntBASIC23.59■■□□□ 1.37
COL5A2P05997 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
COL5A2P05997 ESPNP-201ENST00000270691 2015 ntBASIC23.59■■□□□ 1.37
COL5A2P05997 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
COL5A2P05997 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.59■■□□□ 1.37
COL5A2P05997 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
COL5A2P05997 TSEN15P1-201ENST00000423257 515 ntBASIC23.59■■□□□ 1.37
COL5A2P05997 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC23.59■■□□□ 1.37
COL5A2P05997 AP000344.2-201ENST00000512987 629 ntBASIC23.59■■□□□ 1.37
COL5A2P05997 POLD4-207ENST00000531239 584 ntTSL 2 BASIC23.59■■□□□ 1.37
COL5A2P05997 AC011467.4-201ENST00000594891 528 ntBASIC23.59■■□□□ 1.37
COL5A2P05997 AC093010.1-201ENST00000473625 1624 ntBASIC23.59■■□□□ 1.37
COL5A2P05997 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
COL5A2P05997 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
COL5A2P05997 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.58■■□□□ 1.37
COL5A2P05997 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.58■■□□□ 1.37
COL5A2P05997 SIRPAP1-201ENST00000448467 1770 ntBASIC23.58■■□□□ 1.37
COL5A2P05997 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL5A2P05997 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL5A2P05997 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL5A2P05997 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL5A2P05997 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.58■■□□□ 1.37
COL5A2P05997 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC23.58■■□□□ 1.37
COL5A2P05997 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.58■■□□□ 1.37
COL5A2P05997 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL5A2P05997 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.58■■□□□ 1.37
COL5A2P05997 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL5A2P05997 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC23.58■■□□□ 1.37
COL5A2P05997 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
COL5A2P05997 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
COL5A2P05997 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.58■■□□□ 1.37
COL5A2P05997 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL5A2P05997 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.58■■□□□ 1.36
COL5A2P05997 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
COL5A2P05997 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC23.58■■□□□ 1.36
COL5A2P05997 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.58■■□□□ 1.36
COL5A2P05997 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 STOM-202ENST00000347359 870 ntTSL 2 BASIC23.57■■□□□ 1.36
COL5A2P05997 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 AL139400.1-201ENST00000366220 510 ntBASIC23.57■■□□□ 1.36
COL5A2P05997 WDR53-203ENST00000429115 683 ntTSL 2 BASIC23.57■■□□□ 1.36
COL5A2P05997 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC23.57■■□□□ 1.36
COL5A2P05997 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
COL5A2P05997 AL049757.1-201ENST00000616842 1596 ntBASIC23.57■■□□□ 1.36
COL5A2P05997 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL5A2P05997 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC23.57■■□□□ 1.36
COL5A2P05997 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.57■■□□□ 1.36
COL5A2P05997 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
COL5A2P05997 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.56■■□□□ 1.36
COL5A2P05997 SYS1-203ENST00000414310 795 ntTSL 3 BASIC23.56■■□□□ 1.36
COL5A2P05997 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC23.56■■□□□ 1.36
COL5A2P05997 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.56■■□□□ 1.36
COL5A2P05997 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 AC092364.2-202ENST00000597012 1073 ntBASIC23.56■■□□□ 1.36
COL5A2P05997 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.56■■□□□ 1.36
COL5A2P05997 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
COL5A2P05997 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
COL5A2P05997 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.56■■□□□ 1.36
COL5A2P05997 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
COL5A2P05997 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.56■■□□□ 1.36
COL5A2P05997 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 GOLGA6L17P-202ENST00000614358 1398 ntBASIC23.56■■□□□ 1.36
COL5A2P05997 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL5A2P05997 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC23.56■■□□□ 1.36
COL5A2P05997 COX5BP2-201ENST00000392354 334 ntBASIC23.56■■□□□ 1.36
COL5A2P05997 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC23.56■■□□□ 1.36
COL5A2P05997 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.56■■□□□ 1.36
COL5A2P05997 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.56■■□□□ 1.36
COL5A2P05997 KRT19P2-202ENST00000557173 1012 ntBASIC23.56■■□□□ 1.36
COL5A2P05997 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
COL5A2P05997 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.56■■□□□ 1.36
COL5A2P05997 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.56■■□□□ 1.36
COL5A2P05997 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.55■■□□□ 1.36
COL5A2P05997 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms