Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.41■□□□□ 0.54
MT-ND3P03897 AL445228.2-201ENST00000605589 952 ntBASIC18.41■□□□□ 0.54
MT-ND3P03897 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND3P03897 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND3P03897 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MT-ND3P03897 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MT-ND3P03897 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MT-ND3P03897 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-ND3P03897 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 ARMC10P1-201ENST00000313754 855 ntBASIC18.4■□□□□ 0.54
MT-ND3P03897 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MT-ND3P03897 FAM207BP-201ENST00000447172 505 ntBASIC18.4■□□□□ 0.54
MT-ND3P03897 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.4■□□□□ 0.54
MT-ND3P03897 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MT-ND3P03897 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MT-ND3P03897 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-ND3P03897 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.4■□□□□ 0.54
MT-ND3P03897 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MT-ND3P03897 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MT-ND3P03897 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.4■□□□□ 0.54
MT-ND3P03897 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MT-ND3P03897 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.39■□□□□ 0.54
MT-ND3P03897 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
MT-ND3P03897 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.39■□□□□ 0.54
MT-ND3P03897 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.39■□□□□ 0.53
MT-ND3P03897 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
MT-ND3P03897 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 KRT18P57-201ENST00000443599 1254 ntBASIC18.39■□□□□ 0.53
MT-ND3P03897 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.39■□□□□ 0.53
MT-ND3P03897 AC008040.2-201ENST00000461049 708 ntBASIC18.39■□□□□ 0.53
MT-ND3P03897 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 KRT18P35-201ENST00000510488 1269 ntBASIC18.39■□□□□ 0.53
MT-ND3P03897 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
MT-ND3P03897 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MT-ND3P03897 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.39■□□□□ 0.53
MT-ND3P03897 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
MT-ND3P03897 AC073508.3-201ENST00000619697 1419 ntBASIC18.39■□□□□ 0.53
MT-ND3P03897 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
MT-ND3P03897 AL645608.8-201ENST00000606034 2086 ntBASIC18.38■□□□□ 0.53
MT-ND3P03897 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MT-ND3P03897 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.38■□□□□ 0.53
MT-ND3P03897 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MT-ND3P03897 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 CCR12P-201ENST00000446203 998 ntBASIC18.38■□□□□ 0.53
MT-ND3P03897 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
MT-ND3P03897 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-ND3P03897 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-ND3P03897 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MT-ND3P03897 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.38■□□□□ 0.53
MT-ND3P03897 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
MT-ND3P03897 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MT-ND3P03897 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms