Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.9■□□□□ 0.62
TRUB2O95900 AC132938.6-201ENST00000623828 1655 ntBASIC18.9■□□□□ 0.62
TRUB2O95900 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.9■□□□□ 0.62
TRUB2O95900 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.9■□□□□ 0.62
TRUB2O95900 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.9■□□□□ 0.62
TRUB2O95900 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.9■□□□□ 0.62
TRUB2O95900 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRUB2O95900 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRUB2O95900 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRUB2O95900 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRUB2O95900 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRUB2O95900 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRUB2O95900 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB2O95900 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
TRUB2O95900 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
TRUB2O95900 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRUB2O95900 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
TRUB2O95900 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB2O95900 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRUB2O95900 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.89■□□□□ 0.61
TRUB2O95900 KRT8P26-201ENST00000534154 1276 ntBASIC18.89■□□□□ 0.61
TRUB2O95900 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.89■□□□□ 0.61
TRUB2O95900 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
TRUB2O95900 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.89■□□□□ 0.61
TRUB2O95900 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRUB2O95900 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.89■□□□□ 0.61
TRUB2O95900 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.89■□□□□ 0.61
TRUB2O95900 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 LINC00167-201ENST00000530583 1419 ntBASIC18.89■□□□□ 0.61
TRUB2O95900 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRUB2O95900 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRUB2O95900 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 AL121672.3-201ENST00000608644 468 ntBASIC18.88■□□□□ 0.61
TRUB2O95900 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.88■□□□□ 0.61
TRUB2O95900 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRUB2O95900 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRUB2O95900 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.88■□□□□ 0.61
TRUB2O95900 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.88■□□□□ 0.61
TRUB2O95900 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.88■□□□□ 0.61
TRUB2O95900 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
TRUB2O95900 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRUB2O95900 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRUB2O95900 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRUB2O95900 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRUB2O95900 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRUB2O95900 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms