Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC067852.2-201ENST00000590513 2313 ntBASIC16.65■□□□□ 0.26
NKX2-2O95096 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NKX2-2O95096 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.65■□□□□ 0.26
NKX2-2O95096 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.65■□□□□ 0.26
NKX2-2O95096 AL136038.3-201ENST00000561909 1096 ntBASIC16.65■□□□□ 0.26
NKX2-2O95096 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.65■□□□□ 0.26
NKX2-2O95096 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
NKX2-2O95096 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.65■□□□□ 0.26
NKX2-2O95096 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.65■□□□□ 0.26
NKX2-2O95096 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NKX2-2O95096 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
NKX2-2O95096 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.64■□□□□ 0.26
NKX2-2O95096 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
NKX2-2O95096 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX2-2O95096 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX2-2O95096 AL031133.1-201ENST00000406807 723 ntBASIC16.64■□□□□ 0.25
NKX2-2O95096 AL645929.1-201ENST00000420084 975 ntBASIC16.64■□□□□ 0.25
NKX2-2O95096 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX2-2O95096 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX2-2O95096 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX2-2O95096 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.64■□□□□ 0.25
NKX2-2O95096 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
NKX2-2O95096 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.64■□□□□ 0.25
NKX2-2O95096 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NKX2-2O95096 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NKX2-2O95096 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 Z83836.1-201ENST00000624605 1642 ntBASIC16.63■□□□□ 0.25
NKX2-2O95096 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NKX2-2O95096 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NKX2-2O95096 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
NKX2-2O95096 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX2-2O95096 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.63■□□□□ 0.25
NKX2-2O95096 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX2-2O95096 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.63■□□□□ 0.25
NKX2-2O95096 NTF6B-201ENST00000591913 560 ntBASIC16.63■□□□□ 0.25
NKX2-2O95096 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NKX2-2O95096 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX2-2O95096 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX2-2O95096 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NKX2-2O95096 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX2-2O95096 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX2-2O95096 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms