Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.98■□□□□ 0.15
ALX3O95076 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.98■□□□□ 0.15
ALX3O95076 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.98■□□□□ 0.15
ALX3O95076 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 CROCCP2-202ENST00000412962 2773 ntBASIC15.98■□□□□ 0.15
ALX3O95076 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.98■□□□□ 0.15
ALX3O95076 AC128676.1-201ENST00000454392 318 ntBASIC15.98■□□□□ 0.15
ALX3O95076 B3GAT3P1-201ENST00000471720 806 ntBASIC15.98■□□□□ 0.15
ALX3O95076 AC011506.1-201ENST00000474329 610 ntBASIC15.98■□□□□ 0.15
ALX3O95076 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.98■□□□□ 0.15
ALX3O95076 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.98■□□□□ 0.15
ALX3O95076 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.98■□□□□ 0.15
ALX3O95076 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.98■□□□□ 0.15
ALX3O95076 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ALX3O95076 AC093677.2-201ENST00000600169 1863 ntBASIC15.98■□□□□ 0.15
ALX3O95076 OR6D1P-202ENST00000641007 5290 ntBASIC15.98■□□□□ 0.15
ALX3O95076 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
ALX3O95076 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
ALX3O95076 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.98■□□□□ 0.15
ALX3O95076 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.98■□□□□ 0.15
ALX3O95076 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.98■□□□□ 0.15
ALX3O95076 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.98■□□□□ 0.15
ALX3O95076 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.98■□□□□ 0.15
ALX3O95076 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.98■□□□□ 0.15
ALX3O95076 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.98■□□□□ 0.15
ALX3O95076 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ALX3O95076 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.98■□□□□ 0.15
ALX3O95076 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.97■□□□□ 0.15
ALX3O95076 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.97■□□□□ 0.15
ALX3O95076 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.97■□□□□ 0.15
ALX3O95076 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.97■□□□□ 0.15
ALX3O95076 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ALX3O95076 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
ALX3O95076 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
ALX3O95076 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.97■□□□□ 0.15
ALX3O95076 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ALX3O95076 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 AC096733.2-201ENST00000609937 1394 ntBASIC15.97■□□□□ 0.15
ALX3O95076 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.97■□□□□ 0.15
ALX3O95076 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
ALX3O95076 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.97■□□□□ 0.15
ALX3O95076 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
ALX3O95076 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ALX3O95076 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ALX3O95076 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.96■□□□□ 0.15
ALX3O95076 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.96■□□□□ 0.15
ALX3O95076 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ALX3O95076 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ALX3O95076 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ALX3O95076 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.96■□□□□ 0.15
ALX3O95076 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ALX3O95076 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.96■□□□□ 0.15
ALX3O95076 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ALX3O95076 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
ALX3O95076 MIR564-202ENST00000385049 94 ntBASIC15.96■□□□□ 0.15
ALX3O95076 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ALX3O95076 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ALX3O95076 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms