Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CLSTN1O94985 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLSTN1O94985 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLSTN1O94985 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.97■□□□□ 0.79
CLSTN1O94985 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.97■□□□□ 0.79
CLSTN1O94985 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 AC112777.1-201ENST00000540175 1423 ntBASIC19.97■□□□□ 0.79
CLSTN1O94985 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.97■□□□□ 0.79
CLSTN1O94985 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.97■□□□□ 0.79
CLSTN1O94985 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.97■□□□□ 0.79
CLSTN1O94985 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.97■□□□□ 0.79
CLSTN1O94985 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLSTN1O94985 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.97■□□□□ 0.79
CLSTN1O94985 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 AC092865.7-201ENST00000641832 219 ntBASIC19.97■□□□□ 0.79
CLSTN1O94985 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLSTN1O94985 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.97■□□□□ 0.79
CLSTN1O94985 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLSTN1O94985 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 AL133373.2-201ENST00000623187 2828 ntBASIC19.97■□□□□ 0.79
CLSTN1O94985 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLSTN1O94985 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 RCN1P1-201ENST00000400413 996 ntBASIC19.96■□□□□ 0.79
CLSTN1O94985 AK4P3-201ENST00000418260 669 ntBASIC19.96■□□□□ 0.79
CLSTN1O94985 BX664615.1-201ENST00000443558 458 ntBASIC19.96■□□□□ 0.79
CLSTN1O94985 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
CLSTN1O94985 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.96■□□□□ 0.79
CLSTN1O94985 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.96■□□□□ 0.79
CLSTN1O94985 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CLSTN1O94985 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.96■□□□□ 0.79
CLSTN1O94985 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.96■□□□□ 0.79
CLSTN1O94985 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.96■□□□□ 0.79
CLSTN1O94985 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.96■□□□□ 0.79
CLSTN1O94985 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CLSTN1O94985 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
CLSTN1O94985 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CLSTN1O94985 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.96■□□□□ 0.79
CLSTN1O94985 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLSTN1O94985 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.96■□□□□ 0.79
CLSTN1O94985 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLSTN1O94985 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLSTN1O94985 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLSTN1O94985 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLSTN1O94985 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CLSTN1O94985 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
CLSTN1O94985 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC19.95■□□□□ 0.78
CLSTN1O94985 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.95■□□□□ 0.78
CLSTN1O94985 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLSTN1O94985 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.95■□□□□ 0.78
CLSTN1O94985 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.95■□□□□ 0.78
CLSTN1O94985 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.95■□□□□ 0.78
CLSTN1O94985 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.95■□□□□ 0.78
CLSTN1O94985 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms