Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PFDN1O60925 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PFDN1O60925 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PFDN1O60925 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.13■□□□□ 0.17
PFDN1O60925 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PFDN1O60925 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.13■□□□□ 0.17
PFDN1O60925 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.13■□□□□ 0.17
PFDN1O60925 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.13■□□□□ 0.17
PFDN1O60925 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.13■□□□□ 0.17
PFDN1O60925 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PFDN1O60925 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.13■□□□□ 0.17
PFDN1O60925 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PFDN1O60925 AC010980.1-201ENST00000587192 1142 ntBASIC16.13■□□□□ 0.17
PFDN1O60925 MTDHP2-201ENST00000601468 714 ntBASIC16.13■□□□□ 0.17
PFDN1O60925 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.13■□□□□ 0.17
PFDN1O60925 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
PFDN1O60925 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 CYP2T1P-202ENST00000641596 2535 ntBASIC16.13■□□□□ 0.17
PFDN1O60925 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.13■□□□□ 0.17
PFDN1O60925 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PFDN1O60925 AC021242.3-201ENST00000607598 1377 ntBASIC16.13■□□□□ 0.17
PFDN1O60925 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PFDN1O60925 RARRES2P2-201ENST00000394842 485 ntBASIC16.12■□□□□ 0.17
PFDN1O60925 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.12■□□□□ 0.17
PFDN1O60925 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PFDN1O60925 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PFDN1O60925 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PFDN1O60925 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.12■□□□□ 0.17
PFDN1O60925 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PFDN1O60925 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PFDN1O60925 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.11■□□□□ 0.17
PFDN1O60925 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.11■□□□□ 0.17
PFDN1O60925 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.11■□□□□ 0.17
PFDN1O60925 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
PFDN1O60925 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PFDN1O60925 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.11■□□□□ 0.17
PFDN1O60925 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms