Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 AC020916.1-201ENST00000587762 1774 ntBASIC18.14■□□□□ 0.5
FOXD2O60548 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.14■□□□□ 0.5
FOXD2O60548 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.14■□□□□ 0.5
FOXD2O60548 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
FOXD2O60548 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
FOXD2O60548 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 AC132008.2-207ENST00000454517 770 ntBASIC18.14■□□□□ 0.49
FOXD2O60548 MIR3197-201ENST00000582241 73 ntBASIC18.14■□□□□ 0.49
FOXD2O60548 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
FOXD2O60548 AC055717.3-201ENST00000622967 595 ntBASIC18.14■□□□□ 0.49
FOXD2O60548 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.14■□□□□ 0.49
FOXD2O60548 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.14■□□□□ 0.49
FOXD2O60548 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.14■□□□□ 0.49
FOXD2O60548 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXD2O60548 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
FOXD2O60548 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
FOXD2O60548 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.14■□□□□ 0.49
FOXD2O60548 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 AL390961.4-201ENST00000623958 2535 ntBASIC18.13■□□□□ 0.49
FOXD2O60548 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FOXD2O60548 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
FOXD2O60548 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
FOXD2O60548 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXD2O60548 AC096582.2-201ENST00000510860 516 ntBASIC18.13■□□□□ 0.49
FOXD2O60548 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXD2O60548 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.13■□□□□ 0.49
FOXD2O60548 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.13■□□□□ 0.49
FOXD2O60548 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
FOXD2O60548 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.13■□□□□ 0.49
FOXD2O60548 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
FOXD2O60548 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.13■□□□□ 0.49
FOXD2O60548 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.12■□□□□ 0.49
FOXD2O60548 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
FOXD2O60548 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
FOXD2O60548 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.12■□□□□ 0.49
FOXD2O60548 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms