Protein–RNA interactions for Protein: O00453

LST1, Leukocyte-specific transcript 1 protein, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LST1O00453 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 AC008406.3-201ENST00000620001 1374 ntBASIC11.74□□□□□ -0.53
LST1O00453 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC11.74□□□□□ -0.53
LST1O00453 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.74□□□□□ -0.53
LST1O00453 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC11.74□□□□□ -0.53
LST1O00453 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC11.74□□□□□ -0.53
LST1O00453 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LST1O00453 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
LST1O00453 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LST1O00453 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
LST1O00453 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LST1O00453 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
LST1O00453 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LST1O00453 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LST1O00453 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
LST1O00453 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.73□□□□□ -0.53
LST1O00453 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LST1O00453 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.73□□□□□ -0.53
LST1O00453 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LST1O00453 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.73□□□□□ -0.53
LST1O00453 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC11.73□□□□□ -0.53
LST1O00453 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.73□□□□□ -0.53
LST1O00453 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC11.73□□□□□ -0.53
LST1O00453 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.73□□□□□ -0.53
LST1O00453 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LST1O00453 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC11.73□□□□□ -0.53
LST1O00453 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC11.73□□□□□ -0.53
LST1O00453 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC11.73□□□□□ -0.53
LST1O00453 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.73□□□□□ -0.53
LST1O00453 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC11.73□□□□□ -0.53
LST1O00453 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC11.73□□□□□ -0.53
LST1O00453 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC11.73□□□□□ -0.53
LST1O00453 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 PHGDH-209ENST00000641074 1780 ntBASIC11.73□□□□□ -0.53
LST1O00453 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LST1O00453 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LST1O00453 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.72□□□□□ -0.53
LST1O00453 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
LST1O00453 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.72□□□□□ -0.53
LST1O00453 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC11.72□□□□□ -0.53
LST1O00453 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 GMCL1P1-201ENST00000463439 1581 ntBASIC11.72□□□□□ -0.53
LST1O00453 MYLKP1-201ENST00000509077 1580 ntBASIC11.72□□□□□ -0.53
LST1O00453 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC11.72□□□□□ -0.53
LST1O00453 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC11.72□□□□□ -0.53
LST1O00453 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LST1O00453 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms