Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CHKB-CPT1BH3BT56 DBET-201ENST00000630918 3363 ntBASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 AC132872.4-202ENST00000622924 2756 ntBASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 GPX1-201ENST00000419349 1106 ntBASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 OR2I1P-207ENST00000453522 948 ntBASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CHKB-CPT1BH3BT56 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CHKB-CPT1BH3BT56 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms