Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL1A6NKG5 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RTL1A6NKG5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.81■■□□□ 1.4
RTL1A6NKG5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL1A6NKG5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RTL1A6NKG5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RTL1A6NKG5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC23.8■■□□□ 1.4
RTL1A6NKG5 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.8■■□□□ 1.4
RTL1A6NKG5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC23.8■■□□□ 1.4
RTL1A6NKG5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 AL353593.2-201ENST00000602529 1483 ntBASIC23.8■■□□□ 1.4
RTL1A6NKG5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RTL1A6NKG5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RTL1A6NKG5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL1A6NKG5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.79■■□□□ 1.4
RTL1A6NKG5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 AC073621.1-201ENST00000392730 636 ntBASIC23.79■■□□□ 1.4
RTL1A6NKG5 UNC93B6-202ENST00000528242 690 ntBASIC23.79■■□□□ 1.4
RTL1A6NKG5 AC006557.2-201ENST00000592985 1240 ntBASIC23.79■■□□□ 1.4
RTL1A6NKG5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.79■■□□□ 1.4
RTL1A6NKG5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.79■■□□□ 1.4
RTL1A6NKG5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC23.79■■□□□ 1.4
RTL1A6NKG5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.79■■□□□ 1.4
RTL1A6NKG5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.79■■□□□ 1.4
RTL1A6NKG5 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 AC022898.2-201ENST00000616822 1312 ntBASIC23.79■■□□□ 1.4
RTL1A6NKG5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTL1A6NKG5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 AC087289.5-201ENST00000586076 3175 ntBASIC23.78■■□□□ 1.4
RTL1A6NKG5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 AC103564.2-201ENST00000432853 1299 ntBASIC23.78■■□□□ 1.4
RTL1A6NKG5 AC009947.1-201ENST00000444350 727 ntBASIC23.78■■□□□ 1.4
RTL1A6NKG5 PRYP5-201ENST00000451909 266 ntBASIC23.78■■□□□ 1.4
RTL1A6NKG5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL1A6NKG5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL1A6NKG5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL1A6NKG5 COX5BP2-201ENST00000392354 334 ntBASIC23.77■■□□□ 1.4
RTL1A6NKG5 MIR940-201ENST00000401276 94 ntBASIC23.77■■□□□ 1.4
RTL1A6NKG5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.77■■□□□ 1.4
RTL1A6NKG5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
RTL1A6NKG5 AC073592.5-201ENST00000624854 528 ntBASIC23.77■■□□□ 1.4
RTL1A6NKG5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
RTL1A6NKG5 TNXA-203ENST00000507684 2038 ntBASIC23.76■■□□□ 1.39
RTL1A6NKG5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms