Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 AC096633.1-201ENST00000422446 749 ntBASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 AC027307.3-201ENST00000594262 1100 ntBASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM88BA6NKF7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM88BA6NKF7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TMEM88BA6NKF7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM88BA6NKF7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM88BA6NKF7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 AC010460.3-201ENST00000511359 1579 ntBASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 GGTLC5P-201ENST00000617623 998 ntBASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 AC007375.3-201ENST00000600936 2314 ntBASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 LINC01126-201ENST00000623515 1646 ntBASIC20.82■□□□□ 0.92
TMEM88BA6NKF7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 AC141586.3-201ENST00000562166 1838 ntBASIC20.81■□□□□ 0.92
TMEM88BA6NKF7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 CRB3P1-201ENST00000449338 276 ntBASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 TIMM8BP1-201ENST00000452384 211 ntBASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.8■□□□□ 0.92
TMEM88BA6NKF7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms