Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 AP000867.3-201ENST00000524675 377 ntBASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 AC010240.3-201ENST00000607688 395 ntBASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TUBAL3A6NHL2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 LINC00265-3P-201ENST00000447588 903 ntBASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBAL3A6NHL2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBAL3A6NHL2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBAL3A6NHL2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBAL3A6NHL2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 AC106820.2-201ENST00000563775 3264 ntBASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 AC011270.2-201ENST00000624293 2550 ntBASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 AC246785.2-201ENST00000432512 513 ntBASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 DRAXINP1-201ENST00000437611 948 ntBASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 RNF126P1-202ENST00000569893 925 ntBASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 AL121772.3-201ENST00000610840 674 ntBASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBAL3A6NHL2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms