Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC189A1A4V9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC189A1A4V9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC189A1A4V9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC189A1A4V9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC189A1A4V9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC189A1A4V9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC189A1A4V9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.08■□□□□ 0.49
CCDC189A1A4V9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC189A1A4V9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 AP003071.4-201ENST00000562276 1284 ntBASIC18.08■□□□□ 0.48
CCDC189A1A4V9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 MIR4785-201ENST00000585005 73 ntBASIC18.08■□□□□ 0.48
CCDC189A1A4V9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC189A1A4V9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 AC009102.3-201ENST00000623118 1491 ntBASIC18.07■□□□□ 0.48
CCDC189A1A4V9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 AC138028.4-201ENST00000564984 1845 ntBASIC18.07■□□□□ 0.48
CCDC189A1A4V9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC189A1A4V9 AC092338.2-201ENST00000568827 1415 ntBASIC18.06■□□□□ 0.48
CCDC189A1A4V9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC189A1A4V9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms