Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP4B1Q9Y6B7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 FLJ13224-201ENST00000313737 1514 ntBASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 MESTP1-201ENST00000404287 994 ntBASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 AC011506.1-201ENST00000474329 610 ntBASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 AC011298.2-201ENST00000617989 482 ntBASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.37■□□□□ 0.37
AP4B1Q9Y6B7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 RBM17P1-201ENST00000453646 1190 ntBASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP4B1Q9Y6B7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 BX088651.1-201ENST00000540551 451 ntBASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
AP4B1Q9Y6B7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms