Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 AC034232.1-201ENST00000506026 1064 ntBASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 AC140113.3-201ENST00000605663 199 ntBASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 AC097493.4-201ENST00000641197 219 ntBASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 AC134043.2-201ENST00000624206 2238 ntBASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGA11Q9Y5H2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 PVRIG2P-201ENST00000435460 978 ntBASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 AC005363.2-201ENST00000618631 242 ntBASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGA11Q9Y5H2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGA11Q9Y5H2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 GNAS-203ENST00000306120 1878 ntBASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 AC012306.2-201ENST00000609350 630 ntBASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGA11Q9Y5H2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms