Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF6Q9Y4K3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF6Q9Y4K3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF6Q9Y4K3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF6Q9Y4K3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAF6Q9Y4K3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 CCR12P-201ENST00000446203 998 ntBASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAF6Q9Y4K3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAF6Q9Y4K3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AL355312.1-201ENST00000407115 2176 ntBASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 UNC93B2-201ENST00000285383 730 ntBASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 RBM17P1-201ENST00000453646 1190 ntBASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 Z99916.2-201ENST00000604037 246 ntBASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AC080080.1-201ENST00000625121 2420 ntBASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAF6Q9Y4K3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAF6Q9Y4K3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms