Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB4Q9UN71 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGB4Q9UN71 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGB4Q9UN71 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB4Q9UN71 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB4Q9UN71 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGB4Q9UN71 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB4Q9UN71 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 AP000593.1-201ENST00000393668 712 ntBASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 MCCD1P1-208ENST00000445732 328 ntBASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 UBE2SP1-201ENST00000450587 669 ntBASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 AC011676.5-201ENST00000624864 2660 ntBASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGB4Q9UN71 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 AC096733.2-201ENST00000609937 1394 ntBASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 MESTP1-201ENST00000404287 994 ntBASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 MFAP1P1-201ENST00000442257 1255 ntBASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 NUDT16P1-203ENST00000513809 620 ntBASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 KRT18P41-201ENST00000518924 1277 ntBASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB4Q9UN71 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 MIR564-202ENST00000385049 94 ntBASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 AC116562.2-201ENST00000507042 360 ntBASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 AC097488.1-201ENST00000507834 756 ntBASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB4Q9UN71 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms