Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 CAHM-201ENST00000604200 896 ntBASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AL365203.3-201ENST00000609742 2057 ntBASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 AC007686.3-201ENST00000619017 3487 ntBASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
CDC42SE1Q9NRR8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC9.21□□□□□ -0.93
CDC42SE1Q9NRR8 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms