Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VCX3BQ9H321 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VCX3BQ9H321 CROCCP2-202ENST00000412962 2773 ntBASIC17.23■□□□□ 0.35
VCX3BQ9H321 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 AC073210.2-201ENST00000430369 194 ntBASIC17.22■□□□□ 0.35
VCX3BQ9H321 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VCX3BQ9H321 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VCX3BQ9H321 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 AL136967.2-201ENST00000623968 743 ntBASIC17.21■□□□□ 0.35
VCX3BQ9H321 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.21■□□□□ 0.35
VCX3BQ9H321 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VCX3BQ9H321 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VCX3BQ9H321 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
VCX3BQ9H321 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
VCX3BQ9H321 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VCX3BQ9H321 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms