Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC116562.4-202ENST00000641738 218 ntBASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SHANK2-AS3Q9BTD1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC010240.3-201ENST00000607688 395 ntBASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SHANK2-AS3Q9BTD1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SHANK2-AS3Q9BTD1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
SHANK2-AS3Q9BTD1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
SHANK2-AS3Q9BTD1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
SHANK2-AS3Q9BTD1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms