Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SEC22CQ9BRL7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 HTR7P1-201ENST00000538670 1336 ntBASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SEC22CQ9BRL7 KRT8P41-201ENST00000533985 1514 ntBASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 AC011767.1-201ENST00000617410 1153 ntBASIC15.27■□□□□ 0.04
SEC22CQ9BRL7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEC22CQ9BRL7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 KRT8P3-201ENST00000519669 1449 ntBASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SEC22CQ9BRL7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms